Trio-R: a script for assessing maternity and paternity in trio studies performed on Agilent chromosomal microarrays

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Package 'trio' Title Testing of Snps and Snp Interactions in Case-parent Trio Studies

Description Testing SNPs and SNP interactions with a genotypic TDT. This package furthermore contains functions for computing pairwise values of LD measures and for identifying LD blocks, as well as functions for setting up matched case pseudo-control genotype data for case-parent trios in order to run trio logic regression, for imputing missing genotypes in trios, for simulating case-parent tr...

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Package ‘ trio ’

Description Testing SNPs and SNP interactions with a genotypic TDT. This package furthermore contains functions for computing pairwise values of LD measures and for identifying LD blocks, as well as functions for setting up matched case pseudo-control genotype data for case-parent trios in order to run trio logic regression, for imputing missing genotypes in trios, for simulating case-parent tr...

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A Trio of Concerns.

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Continuous Uncertainty in Trio

We present extensions to Trio for incorporating continuous uncertainty into the system. Data items with uncertain possible values drawn from a continuous domain are represented through a generic set of functions. Our approach enables precise and efficient representation of arbitrary probability distribution functions, along with standard distributions such as Gaussians. We also describe how que...

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ژورنال

عنوان ژورنال: BMC Medical Informatics and Decision Making

سال: 2018

ISSN: 1472-6947

DOI: 10.1186/s12911-018-0684-9